Processing

The menu Tools is your central access to the most important processing of Cartool, while you can find a few utilities under the File menu.

Tools menu
File menu

Tools menu

EEG and Tracks

Exporting / Reprocessing Tracks
Scanning Tracks for Markers
File Calculator

Averaging EEG Files / Interactive
Averaging EEG Files / Batch
Interpolating EEG Files
PCA on current EEG file

Segmentation of EEG Files to Micro-States
Back-Fitting template maps
Correlation / Coherence between files
Computing Templates / Centroids from cluster files
Averaging .error.data files

Creating ROIs from Tracks
Statistics on Tracks
Standardizing Tracks
Histograms on current EEG

Frequency

Frequency Analysis of EEG Files
Averaging FREQ Files / Batch

Correlation / Coherence between files
Statistics on FREQ files

Frequency Files Conversions

MRIs and Volumes

MRIs Preprocessing
Results of Inverse Solutions to Volumes

Coregistering MRIs
Computing Template Brain
Mering set of masks into single tissues volume

Skull Stripping Full Head MRIs
Bias Field Correction
Extracting the CSF
Extracting the Grey Matter
Extracting the White Matter
Extracting the Black / Grey / White Tissues
Computing Solution Points from Brain and Grey Mask

Electrodes Coordinates and Solution Points

Downsampling Electrodes
Coregistering Electrodes to MRI Head
Converting Krios scanner csv to xyz
Creating ROIs for Electrodes / Solution Points

Computing Template of Electrodes Coordinates

Computing Solution Points from Brain and Grey Mask

Transforming XYZ or SPI Set of Points

Inverse Solution

Creating Inverse Solution Matrices
Computing Results of Inverse Solutions
Results of Inverse Solutions to Volumes
Results of Inverse Solutions to Clouds of Vectors

Computing Templates / Centroids from Cluster files
Averaging RIS Files / Batch
Averaging .error.data files

Statistics on RIS files

Generating Synthetic Data

Generate Temporal Segments / EEG
Generate Temporal Segments / Inverse Space
Generate White Noise Data

Oscillating Dipoles

File menu

File | File Conversions sub-menu

VRB to TVA

To extract a trigger validation file .tva from the verbose file .vrb of an Averaging.

FREQ to Tracks

To batch split .freq files (3 dimensional) into tracks files (2 dimensional), with one file per frequency.

Tracks to FREQ

To batch fusion tracks file back into a .freq file.

FREQ to Spectrum

To batch split .freq files (3 dimensional) into tracks files (2 dimensional), with one file per spectrum.

File | Preferences | Files sub-menu

Associate files with Cartool

Restores all the file associations to the default of Cartool, f.ex. associating .ep .eph files to directly open on double-click.

Remove file association from Cartool

Removes all the file associations made toward Cartool, you can not double-click a file and it opens into Cartool anymore.

File | Preferences | Graphic sub-menu

Harware Acceleration

Auto: the default, Cartool tries to detect if you have an OpenGL hardware implementation.

On: force using the OpenGL hardware implementation.

Off: force using the (very old) OpenGL software implementation of Windows.

3D Textures

Auto: the default, Cartool tries to use 3D Textures for MRI display.

On: force using the 3D Textures for MRI display.

Off: force the 3D Textures for MRI display off. You might need this if the MRI display does not work, like in some Virtual Machines.

File \| File Conversions sub-menu
VRB to TVA	To extract a trigger validation file .tva from the verbose file .vrb of an Averaging.

FREQ to Tracks	To batch split .freq files (3 dimensional) into tracks files (2 dimensional), with one file per frequency.
Tracks to FREQ	To batch fusion tracks file back into a .freq file.
FREQ to Spectrum	To batch split .freq files (3 dimensional) into tracks files (2 dimensional), with one file per spectrum.

File \| Preferences \| Files sub-menu
Associate files with Cartool	Restores all the file associations to the default of Cartool, f.ex. associating .ep .eph files to directly open on double-click.
Remove file association from Cartool	Removes all the file associations made toward Cartool, you can not double-click a file and it opens into Cartool anymore.

File \| Preferences \| Graphic sub-menu
Harware Acceleration	Auto: the default, Cartool tries to detect if you have an OpenGL hardware implementation. On: force using the OpenGL hardware implementation. Off: force using the (very old) OpenGL software implementation of Windows.
3D Textures	Auto: the default, Cartool tries to use 3D Textures for MRI display. On: force using the 3D Textures for MRI display. Off: force the 3D Textures for MRI display off. You might need this if the MRI display does not work, like in some Virtual Machines.